PUBLICATIONS

Professor Hasnain has >250 publications in peer-reviewed journals of high impact, and >dozen patents. Hasnain has been/is associated with several prestigious journals such as Emerging Infectious Diseases (CDC, USA), Infection Genetics & Evolution (Elsevier), Gut Pathogens, J. Bio Sciences, Current Science, Plos One, Journal of Computer Science and System Biology -Omics Group, Medical Principles and Practice etc. as the Senior Editor/ Receiving Editor/ Editorial Board Member.

COMPLETE LIST OF PUBLICATION BY PROF. SEYED EHTEHSAM HASNAIN

2017
  • (255) .Sharma A, Equbal M. A., Pandey S., Sheikh JA, Ehtesham NZ, Hasnain SE, Chaudhuri TK. “Immunodominant protein MIP_05962 from Mycobacterium indicus pranii displays chaperone activity” The FEBS Journal 2017 Mar 10. doi: 10.1111/febs.14057
  • (254) . Pandey S., Tripathi D., Khubaib M., Kumar A, Sheikh JA, Sumanlatha G., Ehtesham NZ and Hasnain SE. “Mycobacterium tuberculosis peptidyl-prolyl isomerases are immunogenic, alter cytokine profile and aid in intracellular survival” Frontiers in Cellular and Infection Microbiology” 2017 Feb 15;7:38. doi: 10.3389/fcimb.2017.00038. eCollection 2017 Feb 15
  • (253) . Bhuwan M, Suragani M, Ehtesham NZ and Hasnain SE. “Aggregation Prevention Assay for Chaperone Activity of Proteins Using Spectroflurometry”. Bio-Protocol Vol 7, Iss 2, 1/20/2017
2016
  • (252) .Khubaib M, Sheikh JA, Pandey S, Srikanth B, Bhuwan M, Khan N, Hasnain SE and Ehtesham NZ. “Mycobacterium tuberculosis co-operonic PE32/PPE65 proteins alter host immune responses by hampering Th1 response” Frontiers in Microbiology 2016 May 17;7:719. doi: 10.3389/fmicb.2016.00719.
  • (251) . Bhuwan M, Arora N, Sharma A, Khubaib M, Pandey S, Chaudhuri TK, Hasnain SE, Ehtesham NZ. “Mycobacterium tuberculosis Virulence Factor RipA with Chaperone MoxR1 Is Required for Transport through the TAT Secretion System” MBio. 2016 Mar 1;7(2). pii: e02259-15. doi: 10.1128/mBio.02259-15.
  • (250) . Pandey S, Khubaib M, Tripathi D, Sharma A, Choudhary T. K., Hasnain SE, Ehtesham NZ “Mycobacterium tuberculosis peptidyl-prolyl isomerases also exhibit chaperone like activity in-vitro and in-vivo” PLos One 2016 Mar 16;11(3):e0150288. doi: 10.1371/journal.pone.0150288. eCollection 2016
  • (249) .Grover S, Gupta P, Kahlon PS, Goyal S, Grover A, Dalal K, Sabeeha, Ehtesham NZ, Hasnain SE “Analyses of methyltransferases across the pathogenicity spectrum of different Mycobacterial species point to an extremophile connection” Mol Biosyst. 2016 Mar 17 1615-1625
2015
  • (248) . Arish M, Husein A, Kashif M, Hasnain SE, Akhter Y, Rub A (2015) Orchestration of membrane receptor signaling by membrane lipids. Biochimie pii: S0300-9084(15)00109-1.
  • (247) .Rahman SA, Singh Y, Kohli S, Ahmad J, Ehtesham NZ, Tyagi AK, Hasnain SE (2015) Mycobacterium indicus pranii is a distinct genus, not derived from M. intracellulare, and is an organism at an evolutionary transition point between a fast grower and slow grower. mBio 6(2):e00352-15.DOI:10.1128/Mbio.00352-15.
  • (246) . Kohli S, Singh Y, Ehtesham NZ, Hasnain SE (2015) Leprosy immunomodulatory Mycobacterium indicus pranii: Biochemical and molecular genetic features render it a distinct species. Proceedings of the Ranbaxy Symposium on Leprosy, Ranbaxy Science Foundation, India (In press).
  • (245) . Parsa K and Hasnain SE (2015) Proteomics of multidrug resistant Mycobacterium tuberculosis clinical isolates: A peep show on mechanism of drug resistance and perhaps more Ind J Med Res 141: 114-115.
  • (244) .Kohli S, Singh Y, Sowpati DT, Ehtesham NZ, Dobrindt U, Hacker J, Hasnain SE (2015) Human mesenchymal stem cells: New sojourn of bacterial pathogens. Int J Med Microbiol 50925 pii: S1438- 4221(15)00002-8.
2014
  • (243) .Hasnain SE, O’Toole RF, Grover S, Ehtesham NZ (2014). Whole genome sequencing: A new paradigm in the surveillance and control of human tuberculosis. Tuberculosis (Edinb). 95(2):91-4.
  • (242) .Kumar N, Mariappan V, Baddam R, Lankapalli AK, Shaik S, Khean-Lee G, Fai LM, Perkins T, Benghezal M, Hasnain SE, Vadivelu J, Marshall Barry J Ahmed N (2014) Comparative genomic analysis of Helicobacter pylori from Malaysia identifies three distinct lineages suggestive of differential evolution. Nucleic Acids Research 43(1):324-35.
  • (241). Tundup S, Mohareer K, Hasnain SE (2014) Mycobacterium tuberculosis PE25/PPE41 protein complex induces necrosis in macrophages: Role in virulence and disease reactivation? FEBS Open Bio 4: 822–8.
  • (240) .Rahman SA, Singh Y, Kohli S, Ahmad J, Ehtesham NZ, Tyagi AK, Hasnain SE (2014) Comparative analyses of nonpathogenic, opportunistic, and totally pathogenic mycobacteria reveal genomic and biochemical variabilities and highlight the survival attributes of Mycobacterium tuberculosis. mBio 5(6):e02020. http://dx.doi.org/10.1128/m.Bio.02020-14.
  • (239). Singh Y and Hasnain SE (2014) Holobionts: new interventions against infectious diseases, metabolic disorders and even cancer? Ind J Med Res 140(1):11-4.
  • (238). Singh Y, Kohli S, Sowpati DT, Rahman SA, Tyagi AK, Hasnain SE (2014) Gene cooption in mycobacteria and search for virulence attributes: comparative proteomic analyses of Mycobacterium tuberculosis, Mycobacterium indicus pranii and other mycobacteria. Int J Med Microbiol 304(5-6):742-8.
  • (237). Rani PS, Doddam SN, Agrawal S, Sechi LA, Hasnain SE, Kumar A and Ahmed N (2014) Mycobacterium avium subsp. paratuberculosis is not discerned in diabetes mellitus patients in Hyderabad, India. Int J Med Microbiol 304(5-6):620-5.
  • (236). Alamuru NP, Behera S, Butchar JP, Tridandapani S, Suraj S K, Babu PP, Hasnain SE, Ehtesham NZ and Parsa KVL. (2014) A novel immunomodulatory function of PHLPP1: Inhibition of iNOS via attenuation of STAT1 ser727 phosphorylation in mouse macrophages. J Leuko Biol 95:775-783.
2013
  • (235) .Singh Y, Ahmad J, Musarrat J, Ehtesham NZ, Hasnain SE (2013) Emerging importance of holobionts in evolution and in Probiotics. Gut Pathog 5(1):12.
  • (234) .Tyagi AK, Saini V, Hasnain SE (2013) Response to Dr. Alexander’s letter is as follows. Nucleic Acids Res 40: 10832. http://nar.oxfordjournals.org/content/40/21/10832/reply#nar_el_48.
  • (233). Ahmad J, Hasnain SE, Siddiqui MA, Ahamed M, Musarrat J, AlKhedhairy AA(2013) MicroRNA in carcinogenesis and cancer diagnostics: a new paradigm. Ind J Med Res 137(4):680-94.
  • (232) .Kumar A, Lewin A, Rani PS, Qureshi IA, Devi S, Majid M, Kamal E, Marek S, Hasnain SE, Ahmed N (2013) Dormancy Associated Translation Inhibitor (DATIN/Rv0079) of Mycobacterium tuberculosis interacts with TLR2 and induces proinflammatory cytokine expression.Cytokine 64(1):258-64.
  • (231). Mohareer K, Sahdev S, Hasnain SE (2013) Spodoptera frugiperda FKBP- 46 is a consensus p53 motif binding protein J Cellular Biochem 114(4):899-907.
2012
  • (230) .Saini V, Raghuvanshi S, Khurana JP, Ahmed N, Hasnain SE, Tyagi AK, Tyagi AK (2012) Massive gene acquisitions in Mycobacterium indicuspranii provide a perspective on mycobacterial evolution. Nucleic Acids Res 40(21): 10832-10850.
  • (229) .Kumar A, Majid M, Kunisch R, Rani PS, Qureshi IA, Lewin A, Hasnain SE, Ahmed N (2012) Mycobacterium tuberculosis DosR regulon gene Rv0079 encodes a putative, ‘dormancy associated translation inhibitor (DATIN). PLoS One 7(6):e38709
  • (228). Kohli S, Singh Y, Sharma K, Mittal A, Ehtesham NZ, Hasnain SE (2012) Comparative genomic and proteomic analyses of PE/PPE multigene family of Mycobacterium tuberculosis H37Rv and H37Ra reveal novel and interesting differences with implications in virulence. Nucleic Acids Res 40(15):7113-22.
  • (227) .Ahmed N, Devi SH, Tenguria S, Majid M, Rahman SA, Hasnain SE (2012) Genomic fluidity of the human gastric pathogen Helicobacter pylori, In: Genome Plasticity and Infectious Diseases, (Ed: Dobrindt U) Publisher American Society for Microbiology, USA
  • (226). Akhter Y, Ehebauer MT, Mukhopadhyay S, Hasnain SE (2012) The PE/PPE multigene family codes for virulence factors and is a possible source of mycobacterial antigenic variation: perhaps more? Biochimie 94(1):110-6.
  • (225). Hasnain SE, Friedrich B, Mettenleiter T, Dobrindt U, Hacker J (2012) Climate change and infectious diseases – impact of global warming and
    climate change on infectious diseases: myth or reality? Int J Med Microbiol 302(1):1-3.
2011
  • (224) .Mohareer K, Tundup S, Hasnain SE (2012) Transcriptional regulation of Mycobacterium tuberculosis PE/PPE genes: a molecular switch to virulence? J Mol Microbiol Biotechnol 21(3-40:97-109.
  • (223) .Thomas SK, Iravatham CC, Moni BH, Kumar A, Archana BV, Majid M, Priyadarshini Y, Rani PS, Valluri V, Hasnain SE, Ahmed N (2012) Modern and ancestral genotypes of Mycobacterium tuberculosis from Andhra Pradesh, India. PLoS One 6(11):e27584.
  • (222). Mohareer K, Sahdev S, Hasnain SE (2011) Baculovirus p35 gene is oppositely regulated by P53 and AP-1 like factors in Spodoptera frugiperda. Biochem Biophys Res Commun 414(4):688-93.
  • (221) .Suragani M, Rasheedi S, Hasnain SE, Ehtesham NZ (2011) The translation initiation factor, PeIF5B, from Pisum sativum displays chaperone activity. Biochem Biophys Res Commun 414(2):390-6.
  • (220). Biotechnology for Sustainable Development Eds Hasnain SE, Rashmi, Jha B, Sharan RN, McGraw Hill Publishers, 2011.
  • (219). Alvi A, Ansari SA, Ehtesham NZ, Rizwan M, Devi S, Sechi LA, Qureshi IA, Hasnain SE, Ahmed N (2011) Concurrent proinflammatory and
    apoptotic activity of a Helicobacter pylori protein (HP986) points to its role in chronic persistence. PLoS One 6(7):e22530.
  • (218). Sharadamma N, Khan K, Kumar S, Patil KN, Hasnain SE, Muniyappa K (2011) Synergy between the N-terminal and C-terminal domains of Mycobacterium tuberculosis HupB is essential for high-affinity binding, DNA supercoiling and inhibition of RecA-promoted strand exchange. FEBS J 278(18):3447-62.
  • (217). Ehtesham NZ, Nasiruddin M, Alvi A, Kumar BK, Ahmed N, Peri S, Murthy KJ, Hasnain SE (2011) Treatment end point determinants for
    pulmonary tuberculosis: human resistin as a surrogate biomarker. Tuberculosis (Edinb) 91(4):293-9.
  • (216). Hasnain SE, Banerjee S, Ehtesham NZ (2011) Translating advances in genomic research into clinical practice: the challenges ahead. Med Princ
    Pract 220(4):392-4.
  • (215). Ahmed N, Hasnain SE (2011) Molecular epidemiology of tuberculosis in India: moving forward with a systems biology approach. Tuberculosis
    (Edinb) 91(5):407-13.
  • (214). Hasnain SE. (2011) A link between mitochondrial DNA haplogroup and ischemia. Med Princ Pract 20(3):201-2.
  • (213). Banerjee S, Farhana A, Ehtesham NZ, Hasnain SE (2011) Iron acquisition, assimilation and regulation in mycobacteria. Infect Genet Evol 11(5):825-38.
2010
  • (212) .Kumar P, Sardesai AA, Basu B, Hasnain SE (2010) DNA clasping by Mycobacterial HU: The C-terminal region of HupB mediates increased specificity of DNA binding. PLoS ONE 5(9) e12551.
  • (211) .Sai Priya VH, Latha GS, Hasnain SE, Murthy KJ, Valluri VL (2010) Enhanced T cell responsiveness to Mycobacterium bovis BCG r32-kDa Ag correlates with successful anti-tuberculosis treatment in humans.Cytokine 52(3):190-193. PubMed PMID: 20797873.
  • (210). Singh A, Aruna B, Krishnaveni M, Hasnain SE, Ehtesham NZ (2010) Transcription of human resistin gene involves an interaction of Sp1 with
    Peroxisome Proliferator-Activating Receptor gamma (PPARγ). PLoS ONE 5(3):e9912
  • (209) .Kumar P, Joshi DC, Akif M, Akhter Y, Hasnain SE, Mande SC (2010) Mapping conformational transitions in cyclic AMP receptor protein: crystal structure and normal-mode analysis of Mycobacterium tuberculosis apo-cAMP receptor protein. Biophys J. 98(2):305-14.
    PubMed PMID: 20338852; PubMed Central PMCID:PMC2808490.
  • (208). Hasnain, S.E. (2010) Affordable Health for All: India needs a Pink Revolution. In Timeless Inspirator –Relieving Gandhi- (Eds Raghunath Mashelkar) Sakal Papers Ltd., Pune pp 304.
  • (207). Rasheedi S, Suragani M, Haq S.K, Ghosh S, Ehtesham NZ and Hasnain SE (2010) Characterization of LEF4 ligand binding property and its role as part of baculoviral transcription machinery. Molec Cell Biochem 333:83-9.
2009
  • (206) .Nair S, Ramaswamy P A, Ghosh S, Joshi DC, Pathak N, Siddiqui I, Sharma P, Hasnain SE, Mande SC, Mukhopadhyay S (2009) The PPE18 of Mycobacterium tuberculosis interacts with TLR2 and activates IL-10 induction in macrophage. J Immunol 183:6269-81
  • (205) .Bashir N, Kounsar F, Sangita M, Hasnain SE (2009) Mycobacterium tuberculosis conserved hypothetical protein rRv2626c modulates macrophage effector functions. Immunology 130(1):34-45.
  • (204). Sahdev S, Saini KS, Hasnain SE (2009) Baculovirus p35 protein: An overview of its applications across multiple therapeutic and biotechnological arenas. Biotechnology Progress 26:301-312
  • (203) .Priya VH, Anuradha B, Latha GL, Hasnain SE, Murthy KJR, Valluri VL (2009) In-vitro levels of interleukin (IL-10) and Il-12 in response to a
    recombinant 32-kilodalton antigen of Mycobacterium bovis BCG after treatment for tuberculosis. Clinical Vaccine and Immunology 16:111-115
  • (202). Ahmed N, Leonardo AS, Megraud F, Hasnain SE (2009) Gut Pathogens: enteric health and the interface of changing microbiology. Gut Pathogens
    3:1.
  • (201). Rasheedi S, Suragani M, Haq SK, Ghosh S, Ehtesham NZ, Hasnain SE (2009) Biophysical characterization and unfolding of LEF4 factor of RNA
    polymerase from AcNPV. Biopolymers 91:574-82.
  • (200). Kumar SM, Ramachandran A, Hasnain SE, Bashyam MD (2009) Octamer and heat shock elements regulate transcription from the AcMNPV polyhedrin gene promoter. Archives of Virology 154:445-56.
  • (199). Saini V, Raghuvanshi, S, Talwar GP, Ahmed N, Khurana JP, Tyagi A, Hasnain SE, Tyagi, AK (2009) Polyphasic taxonomic analysis establishes
    Mycobacterium indicus pranii as a distinct species. PLoS ONE 4(7):e6263
  • (198) .Rosu V, Ahmed, N, Paccagnini, D, Gerlach G, Fadda, G, Hasnain SE, Zaneti S, Sechi LA (2009) Specific immunoassays confirm association of
    Mycobacterium avium subsp. paratuberculosis with Type-1 but not Type-2 diabetes mellitus. PLoS ONE 4(2):e4386.
  • (197). Kumar S, Farhana A, Hasnain SE (2009) In-vitro helix opening of M.tuberculosis oriC by DnaA occurs at precise location and is inhibited by
    IciA like protein. PLoS ONE 4(1): e4139.
  • (196). Ahmed N, Ehtesham NZ, Hasnain SE (2009) Ancestral Mycobacterium tuberculosis genotypes in India: Implications for TB control programme,
    Infection Genetics and Evolution 9(1):142-6.
2008
  • 248 Arish M, Husein A, Kashif M, Hasnain SE, Akhter Y, Rub A (2015) Orchestration of membrane receptor signaling by membrane lipids. Biochimie pii: S0300-9084(15)00109-1.
  • 247 Rahman SA, Singh Y, Kohli S, Ahmad J, Ehtesham NZ, Tyagi AK, Hasnain SE (2015) Mycobacterium indicus pranii is a distinct genus, not derived from M. intracellulare, and is an organism at an evolutionary transition point between a fast grower and slow grower. mBio 6(2):e00352-15.DOI:10.1128/Mbio.00352-15.
  • 246 Kohli S, Singh Y, Ehtesham NZ, Hasnain SE (2015) Leprosy immunomodulatory Mycobacterium indicus pranii: Biochemical and molecular genetic features render it a distinct species. Proceedings of the Ranbaxy Symposium on Leprosy, Ranbaxy Science Foundation, India (In press).
  • 245 Parsa K and Hasnain SE (2015) Proteomics of multidrug resistant Mycobacterium tuberculosis clinical isolates: A peep show on mechanism of drug resistance and perhaps more Ind J Med Res 141: 114-115.
  • 244 Kohli S, Singh Y, Sowpati DT, Ehtesham NZ, Dobrindt U, Hacker J, Hasnain SE (2015) Human mesenchymal stem cells: New sojourn of bacterial pathogens. Int J Med Microbiol 50925 pii: S1438- 4221(15)00002-8.
2007
  • (187) .Akhtar Y, Yellaboma S, Farhana A, Ranjan A, Ahmed N, Hasnain SE (2007) Genome scale portrait of cAMP-receptor protein (CRP) regulons in
    Mycobacteria points to their role in pathogenesis. Gene 407:148-58.
  • (186) .Ahmed N, Saini V, Raghuvanshi V, Khurana J P, Tyagi A K, Tyagi A K, Hasnain SE (2007) Molecular analysis of a leprosy immunotherapeutic
    bacillus provides insights into Mycobacterium evolution. PLoS One 2(10):e968.
  • (185). Vidyasagar M, Hasnain SE, Mande SC, Nagarajaram HA, Ranjan A, Acharya MS, Anwaruddin, Arun SK, Gyanrajkumar, Kumar D, Priya S, Ranjan S, Reddi BR, Seshadri J, Kumar SP, Swaminathan S, Umadevi P, Vindal V (2007) Biosuite: A comprehensive bioinformatics software
    package (A unique industry-academia collaboration). Current Science 92:29-38.
  • (184) .Rasheedi S, Ramachandran A, Ehtesham NZ, Hasnain SE (2007) Biochemical characterization of Sf9 Sp family-like protein factors reveals interesting features. Archives of Virology 152:10:1819-28.
  • (183). Rasheedi S, Ghosh S, Suragani M, Tuteja N, Sopory SK, Hasnain SE, Ehtesham NZ (2007) Pisum sativum contains a factor with strong homology to CIF5B. Gene 399:144–151.
  • (182). Banerjee S, Nandyala AK, Raviprasad P, Ahmed N, Hasnain SE (2007) Iron dependent RNA-binding activity of Mycobacterium tuberculosis aconitase. J. Bacteriol 189(11):4046-52.
  • (181). Khan N, Ghousunnissa S, Jegadeeswaran SM, Thiagarajan D, Hasnain SE, Mukhopadhyay S (2007) Anti-B7-1/B7-2 antibody elicits innateeffector
    responses in macrophages through NF-KB-dependent pathway. International Immunology 19 (4):477-86.
  • (180). Akhtar Y, Tundup S, Hasnain SE, (2007) Novel biochemical properties of a CRP/FNR family transcription factor from Mycobacterium tuberculosis.
    International Journal of Medical Microbiology 297(6):451-7.
  • (179). Boddupalli CS, Ghosh S, Rahim SS, Nair S, Ehtesham NZ, Hasnain SE, Mukhopadhyay S (2007) Nitric oxide inhibits interleukin-12 p40 through p38 MAPK-mediated regulation of calmodulin and c-rel. Free Radical Biology & Medicine 42:686-697
  • (178). Duggirala A, Kenchappa P, Sharma S, Peeters JK, Ahmed N, Garg P, Das T, Hasnain SE (2007) High-resolution genome profiling differentiated Staphylococcus epidermidis isolated from patients with ocular infections and normal individuals. Invest Ophthalmol Visual Sci 48:3239-3245.
2006
  • (177) .Hasnain SE (2006) Crises in the Universities: Increasing funding gap between Universities and National Laboratories/Scientific Research Institutions – Some Solutions. Current Science 91:1591-1592.
  • (176) .Hasnain SE (2006) Crises in the Universities: Increasing funding gap between Universities and National Laboratories/Scientific Research
    Institutions. Current Science 91:1435-1436.
  • (175). Gutierez MC, Ahmed N, Willery E, Narayanan S, Hasnain SE, Chauhan DS, Katoch VM, Vincen, V, Locht C, Philip S (2006) Predominance of
    ancestral lineages of Mycobacterium tuberculosis in India. Emerging Infectious Diseases 12: 1367-1374.
  • (174) .Bashyam M.D., Hasnain S.E. (2006) Array-based comparative genomic hybridization: applications in cancer and tuberculosis. Bioarrays, Ed. K
    Appasani, Humana Press, 2006
  • (173). Gupta AK, Chauhan DS, Srivastava K, Das R, Batra S, Mittal M, Goswami P, Singhal N, Sharma VD, Venkatesan K, Hasnain SE, Katoch VM (2006) Estimation of efflux mediated multi-drug resistance and its correlation with expression levels of two major efflux pumps in mycobacteria. J Commun Dis 38(3):246-54. PubMed PMID: 17373356.
  • (172). Achary MS, Reddy ABM, Chakraborty S, Panicker SG, Mandal AK,Ahmed N, Balasubramanian D, Hasnain SE, Nagarajaram HA (2006) Disease causing mutations in proteins: structural analysis of the CYP1B1 mutations causing primary congenital glaucoma in humans. Biophys J 91:4329-4339.
  • (171). Akif M, Akhter Y, Hasnain SE, Mande SC (2006) Crystallization and preliminary X-ray crystallographic studies of Mycobacterium tuberculosis
    CRP/FNR family transcription regulator. Acta Crystallogr F62: 873-875.
  • (170). Hasnain SE (2006) Biomedical Research in India can have a global impact provided. Current Science 91: 5-6
  • (169) .Kashyap VK, Guha S, Sitalaximi T, Bindu GH, Hasnain SE, Trivedi R (2006) Genetic structure of Indian populations based on fifteen autosomal microsatellite loci. BMC Genetics 7:28.
  • (168) .Khan N, Rahim SS, Boddupalli CS, Ghousunnissa S, Padma S, Pathak N, Thiagarajan D, Hasnain SE, Mukhopadhyay S (2006) Hydrogen peroxide inhibits IL-12 p40 induction in macrophages by inhibiting c-rel translocation to the nucleus through activation of calmodulin protein.Blood 107:1513-1520
  • (167). Qamra R, Prakash P, Aruna B, Hasnain SE, Mande SC (2006) The 2.15 Ǻ crystal structure of Mycobacterium tuberculosis chorismate mutase
    reveals an unexpected gene duplication, and suggests a role in hostpathogen interactions. Biochemistry 45: 6997-700
  • (166) .Kenchappa P, Duggirala A, Ahmed N, Pathengay A, Das, T, Hasnain SE (2006) Fluorescent amplified fragment length polymorphism (FAFLP)
    genotyping demonstrates the role of biofilm-producing methicillinresistant periocular staphylococcus epidermidis strains in postoperative endophthalmitis. BMC Ophthalmology 6:1.
  • (165) .Mukhopadhyay S, Nair S, Hasnain SE (2006) Nitric oxide friendly rivalry in tuberculosis, Current Signal Transduction Therapy, 1:3
  • (164). Tundup S, Akhter Y, Thiagarajan D, Hasnain SE (2006) Clusters of PE and PPE genes of Mycobacterium tuberculosis are organized in operons:
    Evidence that PE Rv2431c is co-transcribed with PPE Rv2430c and their gene products interact with each other. FEBS Letters 580: 1285-1293.
  • (163). Rao KR, Ahmed N, Srinivas S, Sechi LA, Hasnain SE (2006) Rapid identification of Mycobacterium tuberculosis Beijing genotypes based on
    the basis of the Mycobacterial Interspersed Repetitive Unit locus-26 signature. Journal of Clinical Microbiology 44:2747.
  • (162). Rao KR, Kauser F, Sriramula S, Sechi LA, Ahmed N, Hasnain SE (2006) Analysis of genomic downsizing based on region of difference (RD)
    polymorphism profiling of Mycobacteirum tuberculosis patient isolates reveals geographic partitioning. Journal of Clinical Microbiology 43:5978-5982
  • (161). Kazim SN, Sarin SK, Sharma BC, Khan LA, Hasnain SE (2006) Characterization of naturally occurring and Lamivudine-Induced surface gene mutants of Hepatitis B Virus in patients with chronic Hepatitis B in India. Intervirology 49 :152-60.
2005
  • (160) .Prakash P, Aruna B, Sardesai AA, Hasnain SE. (2005) Purified recombinant hypothetical protein coded by ORF Rv1885c of Mycobacterium tuberculosisexhibits a monofunctional AroQ class of periplasmic chorismate mutase activity. Journal of Biological Chemistry
    280: 19641-19648.
  • (159) .Qamra R, Prakash P, Aruna B, Hasnain SE, Mande SC. (2005) Crystallization and preliminary X-ray crystallographic studies of Mycobacterium tuberculosis chorismate mutase. Acta Crystallogr.F61:473-475.
  • (158). Thakur V, Kazim SN, Guptan RC, Hasnain SE, Bartholomeusz A, Malhotra V, Sarin SK (2005) Transmission of G145R mutant of HBV to an unrelated contact. J Med Virol 76(1):40-6. PubMed PMID: 15778957.
  • (157) .Prakash P, Yellaboina S, Ranjan A, Hasnain SE. (2005) Computational prediction and experimental verification of novel IdeR binding sites in the upstream sequences of Mycobacterium tuberculosis open reading frames. Bioinformatics 21: 2161-2166.
  • (156). Prakash P, Pathak N, Hasnain SE. (2005) pheA (Rv3838c) of Mycobacterium tuberculosis encodes an allosterically regulated monofunctional prephenate dehydratase that requires both catalytic and regulatory domains for optimum activity. Journal of Biological
    Chemistry 280: 20666-20671.
  • (155). Sah NK, Singh SNP, Sahdev S, Banerji S, Jha V, Khan Z, Hasnain SE.(2005) Indian herb ‘Sanjeevani’ (Selaginella bryopteris) can promote
    growth and protect against heat shock and apoptotic activities of ultra violet and oxidative stress. Journal of Biosciences 30: 499-505.
  • (154). Chakrabarti S, Kaur K, Komatireddy S, Acharya M, Devi KR, Mukhopadhyay A, Mandal AK, Hasnain SE, Chandrasekhar G, Thomas R, Ray K. (2005) Gln48His is the prevalent myocilin mutation in primary open angle and primary congenital glaucoma phenotypes in India.
    Molecular Vision 11: 111-113.
  • (153). Kenchappa P, Sangwan VS, Ahmed N, Rao RK, Pathengay A, Mathai A, Mansoori T, Das TP, Hasnain SE, Sharma S. (2005) High-resolution genotyping of Pseudomonas aeruginosa strains linked to acute post cataract surgery endophthalmitis outbreaks in India. Ann Clinicrobiol
    Antimicrob 4:19.
  • (152). Kaur K, Reddy ABM, Mukhopadhyay A, Mandal AK, Hasnain SE, Ray K, Thomas R, Balasubramanian D, Chakrabarti S. [2005] Myocilin gene implicated in primary congenital glaucoma. Clinical Genetics 67: 335-340.
  • (151). Banerjee S, Ashok N, Raviprasad P, Katoch VM, Hasnain SE. (2005) Comparison of Mycobacterium tuberculosis isocitrate dehydrogenases
    (ICD-1 and ICD-2) reveals differences in coenzyme affinity, oligomeric state, pH tolerance and phylogenetic affiliation. BMC Biochemistry 6: 20-26
  • (150). Rahim SS, Khan N, Boddupalli C, Hasnain SE, Sangita M. (2005) IL-10 mediated suppression of IL-12 production in RAW 264.7 cells also
    involves c-rel transcription factor. Immunology 114:313-321.
2004
  • (149) .Reddy ABM, Kaur K, Mandal AK, Panicker SG, Thomas R, Hasnain SE, Balasubramanian D, Chakrabarti S. (2004). Mutation spectrum of the CYP1B1 gene in Indian primary congenital glaucoma patients. Molecular Vision 10:696-702.
  • (148) .Yellaboina S, Ranjan S, Chakhaiyar P, Hasnain SE, Ranjan A (2004) Prediction of DtxR regulon: Identification of binding sites and operons controlled by Diphtheria toxin repressor in Corynebacterium diphtheriae. BMC Microbiology 4: 38.
  • (147). Hasnain SE, Ahmed N. (2004) Leptospirosis: An epidemiologic, genomic and evolutionary perspective. The LANCET: Infectious Diseases 4:543.
  • (146) .Banerjee S, Nandyala A, Podili R, Katoch VM, Murthy KJR, Hasnain SE. (2004) M.tb isocitrate dehydrogenases display strong B-cell response and differentiate BCG-vaccinated healthy controls from TB patients. Proceedings of the National Academy of Sciences, USA 101: 12652-12657.
  • (145). Ghosh S, Rasheedi S, Rahim SS, Banerjee S, Choudhary RK, Chakhaiyar P, Ehtesham NZ, Sangita M, Hasnain SE. (2004) Method for enhancing solubility of the expressed recombinant proteins in E.coli. Biotechniques 37: 47.
  • (144). Vijayachari P, Ahmed N, Sugunan AP, Ghousunnissa S, Rao KR, Hasnain SE, Sehgal SC. (2004) Fluorescent amplified fragment length polymorphism (FAFLP) based molecular epidemiology of Leptospirosis in India. Journal of Clinical Microbiology 42: 3575-3580.
  • (143). Mukhopadhyay S, Srivastava VML, Murthy PK, Hasnain SE. (2004) Poorer NFK-B signaling by microfilariae in macrophages from BALB/c mice affects their ability to produce cytotoxic levels of nitric oxide to kill microfilariae. FEBS Letters 567: 275-280.
  • (142). Bashyam MD, Hasnain SE. (2004) The extracytoplasmic function sigma factors : role in bacterial pathogenesis. Infection, Genetics and Evolution 4: 301-308.
  • (141). Venkaiah B, Viswanathan P, Habib S, Hasnain SE. (2004) An additional copy of the homologous region (hr1) sequence in the Autographa californica Multinucleocapsid Polyhedrosis Virus genome promotes hyper expression of foreign genes. Biochemistry 43: 8143-8151.
  • (140). Chakhaiyar P, Nagalakshmi Y, Aruna B, Murthy KJR, Katoch VM, Hasnain SE. (2004) Regions of high antigenicity within the hypothetical PPE_MPTR Rv2608 ORF show a differential humoral response and a low T cell response in various categories of TB patients. Journal of Infectious Diseases. 190: 1237-1244.
  • (139). Ahmed N, Alam M, Rao R K, Kauser F, Nandyala AK, Qazi NN, Sangal V, Sharma VD, Das R, Katoch VM, Murthy KJR, Suneetha S, Sharma SK, Sechi LA, Gilman RH, HasnainSE. (2004) Molecular genotyping of a large, multi-centric collection of tubercle bacilli indicates geographical partitioning of strain variation: Implications in global epidemiology of M. tuberculosis. Journal of Clinical Microbiology 42: 3240-3247.
  • (138). Choudhary RK, Pullakhandam R, Ehtesham NZ, Hasnain SE (2004) Expression and characterization of Rv2430c, a novel immunodominant antigen of Mycobacterium tuberculosis. Protein Expression and Purification36: 249-253.
  • (137). Majeed AA, Ahmed N, Rao KR, Ghousunnissa S, Kausar F, Bose B, Nagarajaram HA, Katoch VM, Cousins DV, Sechi LA, Gilman RH, Hasnain SE. (2004) AmpliBASE MT TM: A Mycobacterium tuberculosis diversity knowledgebase. Bioinformatics 20: 989-99.
  • (136). Siddiqi N, Das R, Pathak N, Banerjee S, Ahmed N, Katoch VM, Hasnain SE. (2004) Mycobacterium tuberculosis isolate with a distinct genomic identity overexpresses a TAP like efflux pump. Infection 32: 989-112.
  • (135). Panicker SG, Mandal AK, Reddy ABM, Gothwal V, Hasnain SE. (2004) Correlations of genotypes with phenotypes in Indian patients with primary congenital glaucoma. Investigative Ophthalmology and Visual Sciences 45:1149-1156.
  • (134). Ahmed R, Kamra A, Hasnain SE. (2004) Fibroin silk proteins from the non-mulberry silkworm Philosamia ricini are biochemically and immunochemically distinct from those of the mulberry silkworm Bombyx mori. DNA and Cell Biology 23: 149-154.
  • (133). Chakhaiyar P, Hasnain SE. (2004) Defining the mandate of tuberculosis research in a post genomic era. Medical Principles and Practice 13:177-184.
  • (132). Ahmed N, Hasnain SE. (2004) Genomics of Mycobacterium tuberculosis: Old threats and new trends. Indian Journal of Medical Research 120: 207-212.
2003
  • (131) .Viswanathan P, Venkaiah B, Kumar S, Rasheedi S, Vrati S, Bashyam MD, Hasnain SE (2003) The homologous region sequence (hr1) of Autographa californica multinucleocapsid polyhedrosis virus can enhance transcription from non-baculoviral promoters in mammalian cells. Journal of Biological Chemistry 278: 52564-52571.
  • (130) .Reddy ABM, Panicker SG, Mandal AK, Hasnain SE. Balasubramanian, D. (2004) Identification of R368H as a predominant CYPB1 allele causing primary congenital glaucoma in Indian patients. Investigative Ophthalmology and Visual Sciences 44: 4200-4203.
  • (129). Aparna G, Bhuyan AK, Sahdev S, Hasnain SE, Kaufman RJ, Ramaiah, KVA (2003) Stress-induced apoptosis in Spodoptera frugiperda (Sf9) cells: Baculovirus p35 mitigates eIF2 phosphorylation. Biochemistry 42: 15352-15360.
  • (128) .Choudhary RK, Mukhopadhyay S, Chakhaiyar P, Sharma N, Murthy KJR, Katoch VM, Hasnain SE (2003) PPE antigen Rv2430c of Mycobacterium tuberculosis induces a strong B-cell response. Infection and Immunity 71: 6338-6343.
  • (127). Nagarajaram H. A., Hasnain S.E. (2003) Current status of postgenomics computational biology. Computing and Information Sciences: Recent Trends, Narosa Publishing House, New Delhi pp 295-315.
  • (126). Ali S, Hasnain SE (2003) Genomics of the human Y chromosome: 1-Association with male infertility. Gene 321: 25-37.
  • (125). Hasnain SE (2003) Molecular epidemiology of infectious diseases: a case for increased surveillance. Bulletin of the World Health Organization 81: 474 (An invited editorial).
  • (124). Sahdev S, Taneja TK, Mohan M, Sah NK, Khar AK, Hasnain SE, Athar M. (2003) Baculovirus p35 inhibits oxidant-induced activation of mitochondrial apoptotic pathway. Biochemical and Biophysical Research Communications 307: 483-490.
  • (123). Bashyam MD, Hasnain SE. (2003) The human genome sequence: impact on healthcare delivery system. Indian Journal of Medical Research 117: 43-65.
  • (122). Ahmed N, Caviedes L, Alam M, Rao KR, Sangal V, Sheen P, Gilman RH, Hasnain SE. (2003) Distinctiveness of Mycobacterium tuberculosis genotypes from human immunodeficiency virus type 1-seropositive and seronegative patients in Lima, Peru. Journal of Clinical Microbiology 41: 1712-1716.
  • (121). Ahmed N, Alam M, Majeed AA, Rahman AS, Cataldi A, Cousins D, Hasnain SE. (2003) Genome sequence based, comparative analysis of the fluorescent amplified fragment length polymorphisms (FAFLP) of tubercle bacilli from seals provides molecular evidence for a new species within the Mycobacterium tuberculosis complex. Infection, Genetics and Evolution 3:193-9.
  • (120). Mohan M, Taneja TK, Sahdev S, Begum R, Athar M. and Hasnain SE. (2003) Antioxidants prevent UV-induced apoptosis by inhibiting mitochondrial cytochrome C release and caspase activation in Spodoptera frugiperda (Sf9) cells. Cell Biology International 27: 483-490.
  • (119). Hasnain SE, Begum R, Ramaiah KVA, Sahdev S, Shajil EM, Taneja TK, Manjari M, Athar M, Sah NK. and Krishnaveni M. (2003) Host-pathogen interactions during apoptosis. Journal of Biosciences 28: 349-358.
2002
  • (118) .Nagaraju J, Kathirvel M, Ramesh Kumar R, Siddiq EA, Hasnain SE. (2002) Genetic analysis of traditional and evoloved Basmati and nonBasmati rice varieties by using fluorescence-based ISSR-PCR and SSR markers. Proceedings of the National Academy of Sciences, USA. 99: 5836-5841.
  • (117) .Kazim SN, Wakil SM, Khan LA, Hasnain SE, Sarin SK. (2002) Vertical transmission of hepatitis B virus despite maternal lamivudine therapy. The Lancet 359: 1488-89.
  • (116). Ghosh S, Parvez MK, Banerjee K, Sarin SK, Hasnain SE (2002] Baculovirus as mammalian cell expression vector for gene therapy: An emerging strategy. Molecular Therapy 6: 5-11.
  • (115) .Siddiqi N, Shamim M, Hussain S, Choudhary RK, Ahmed N, Prachee Banerjee S, Savithri GR, Alam M, Pathak N, Amin A, Hanief M, Katoch VM. Sharma SK, Hasnain SE. (2002) Molecular characterization of multi-drug resistant isolates of Mycobacterium tuberculosis from patients in North-India. Antimicrobial Agents and Chemotherapy 46: 443-450.
  • (114). Panicker SG, Reddy ABM, Mandal AK, Ahmed N, Nagarajaram H A, Hasnain SE, Balasubramanian D. (2002) Identification of novel mutations causing familial primary congenital glaucomas in Indian pedigrees. Investigative Ophthalmology and Visual Science 43: 1358-1366.
  • (113). Kazim SN, Wakil SM, Khan LA, Hasnain SE, Sarin SK (2002) Vertical transmission of hepatitis B virus despite maternal lamivudine therapy. Erratum in: Lancet 360(9344):1520. PubMed PMID:11988251.
  • (112). Ali S, Hasnain SE (2002) Molecular dissection of the human Ychromosome. Gene 283: 1-10.
  • (111). Ata-ur-Rasheed M, Vemuganti GK, Honavar SG, Ahmed N, Hasnain SE, Kannabiran C (2002) Mutational analysis of the RB1 gene in Indian patients with Retinoblastoma. Ophthalmic Genetics 23: 121-128.
  • (110). Katoch B, Sebastian S, Sahdev S, Padh H, Hasnain SE, Begum R (2002) Programmed cell death and its clinical implications. Indian Journal of Experimental Biology 40: 513.
  • (109). Wakil SM, Kazim SN, Khan LA, Raiesuddin S, Pervez MK, Guptan RC, Thakur V, Hasnain SE, Sarin SK. (2002) Prevalence and profile of mutations associated with lamivudine therapy in Indian patients with chronic hepatitis B in the surface and polymerase genes of hepatitis B virus. J Med Virology 68: 311
  • (108). Panicker SG, Srirangan S, Mandal AK, Reddy ABM, Ahmed N, Hasnain SE. (2002) Novel mutation in FOXCI wing region causing Axenfeld-Rieger anomaly. Investigative Ophthalmology and Visual Science 43: 3613-3616.
2001
  • (107) .Ramachandran A, Jain A, Arora P, Bashyam MD, Chatterjee U, Ghosh S, Parnaik VK, Hasnain SE. (2001) Novel Sp family-like transcription factors are present in insect cells and are involved in transcription from the polyhedrin gene initiator promoter. Journal of Biological Chemistry 276: 23440-23449.
  • (106) .Ramachandran A, Bashyam MD, Viswanathan P, Ghosh S, Kumar MS, Hasnain SE (2001) The bountiful and baffling baculovirus: The story of polyhedrin transcription. Current Science 81: 998-101.
  • (105). Siddiqi N, Shamim M, Amin A, Chauhan DS, Ram D, Kiran S, Singh D, Sharma VD, Katoch VM, Sharma SK, Hanief M, Hasnain SE (2001)
    Typing of drug resistant isolates of Mycobacterium tuberculosis from India using the IS6110 element reveals substantive polymorphsim. Infection, Genetics and Evolution 1: 109-116.
  • (104) .Hasnain SE (2001) MEEGID-V: Fifth international meeting on molecular epidemiology and evolutionary genetics in infectious diseases. Infection, Genetics and Evolution 1: 167-170.
  • (103). Srinivas VR, Bachhawat-Sikder K, Habib S, Hasnain SE, Surolia A (2001) Expression of winged bean agglutinin in Spodoptera frugiperda insect cell expression system. Bioscience Reports 21: 361-367.
  • (102). Kohli A, Gupta V, Krishnamurthy S, Hasnain SE, Prasad R. (2001) Specificity of drug transport mediated by CaMDRI: a major facilitator of Candida albicans. J. Biosciences 26: 333-339
  • (101). Parvez MK, Thakur V, Kazim SN, Guptan RC, Hasnain SE, Sarin SK (2001) Base-pair alterations in the epsilon-lower stem due to a novel double substitution in the precore gene of HBV –e negative variant were recovered by secondary mutations. Virus Genes23:3, 315-320.
2000
  • (100) .Habib S, Hasnain SE (2000) Differential activity of two non-hr origins during replication of the baculovirus AcMNPV genome. Journal of Virology 74: 5182-5189.
  • (99) .Sudhakar A, Ramachandran A, Ghosh S, Hasnain SE, Kaufman RJ, Ramaiah, KVA. (2000) Phosphorylation of serine 51 in initiation factor2 alpha (elF2) promotes complex formation between elF(P) and elF2B and causes inhibition in the guanine nucleotide exchange activity of elF2B. Biochemistry 39: 12929-12938.
  • (98). Bashyam MD, Ramachandran A, Ghosh S, Viswanathan P, Hasnain SE (2000) Multiple regulatory circuits for transcription from the polyhedrin gene promoter of the Autographa californica multiple nucleocapsid nuclear polyhedrosis virus. Proceedings of the Indian National Science Academy B66: 83-96.
  • (97) .Raman LA, Siddiqi N, Shamim M, Deb M, Mehta G, Hasnain SE (2000) Molecular characterization of Mycobacterium abscessus strains isolated from a hospital outbreak, Emerging Infectious Diseases 6: 561-562.
  • (96). Kapoor D, Guptan RC, Wakil SM, Kazim SN, Kaul R, Agarwal, SR, Raisuddin S, Hasnain SE, Sarin SK (2000) Beneficial effects of lamivudine in hepatitis B virus-related decompensated cirrhosis. Journal of Hepatology 33: 308.
  • (95). Shi YP, Das P, Holloway B, Udhayakumar V, Tongren JE, Candal F, Biswas S, Ahmad R, Hasnain SE, Lal AA (2000) Development, expression, and murine testing of a multistage Plasmodium falciparum malaria candidate vaccine. Vaccine 18: 2902-2914.
  • (94). Misra A, Chattopadhyay P, Dinda AK, Sarkar C, Mahapatra AK, Hasnain SE, Sinha S (2000) Extensive intra-tumor heterogeneity in primary human glial tumors as a result of locus non-specific genomic alterations. Journal of Neurooncology 48: 1-12.
  • (93). Sah NK, Taneja TK, Hasnain SE (2000) Mitochondria can power cell to life and death. Resonance 5: 74.
  • (92). Rao GV, Hasnain SE. (2000) CDFD – A synthesis of Quality Service and Globally competitive Science. Asia Pacific Biotech News, Singapore 6: 114-117.
1999
  • (91) .Sah NK, Kaur TK, Pathak N, Begum R, Athar M, Hasnain SE. (1999) The baculovirus anti-apoptotic p35 gene also functions via an oxidant dependent pathway. Proceedings of the National Academy of Sciences, USA 96: 4838-4843.
  • (90) .Shi YP, Hasnain SE, Sacci JB, Holloway BP, Fujioka H, Kumar N, Wohlhueter R, Hoffman SL, Collins W, Lal AA. (1999) Immunogenicity and in-vitro protective efficacy of a novel recombinant multi-stage Plasmodium falciparum candidate vaccine. Proceedings of the National Academy of Sciences, 96: 1615-1620.
  • (89). Begum R., Taneja T.K., Mohan M., Sah N.K., Pathak N., Athar M., Hasnain S.E. (1999) The control and execution of programmed cell death. In Recent Aspects of Cellular & Applied Radiobiology: International Cooperation Bilateral Seminar Series Vol 30(Ed. Schneeweiss, F.A.A. and Sharan R.N.) Forschungszentrum, Juelich, Germany pp 23-45.
  • (88) .Hasnain SE Taneja TK, Sah NK, Mohan M, Pathak N, Sahdev S, Athar M. Totey SM, Begum R. (1999) In-vitro cultured Spodoptera frugiperda insect cells: Model for oxidative stress-induced apoptosis. Journal of Biosciences 24: 13.
  • (87). Sudhakar A, Krishnamurthy T, Jain A, Chatterjee U, Hasnain SE, Kaufman RJ, Ramaiah, KV A. (1999) Serine 48 in initiation factor 2 (eIF2) is required for high-affinity interaction between eIF2(P) and eIF2B. Biochemistry 38: 15398-15405.
  • (86). Puri N, Krishnamurthy S, Habib S, Hasnain SE, Goswami KS, Prasad R. (1999) CDRI, a multidrug resistance gene from Candida albicans, contains multiple regulatory domains in its promoter and the distal AP-1 element mediates its induction by miconazole. FEMS Letters 180: 213-219.
  • (85). Ali S, Hasnain SE. (1999) Conservation, management and documentation of livestock genetic resources and biodiversity: A biotechnology perspective. Current Science 77: 1154.
1998
  • (84) .Ramani K, Hassan MQ, Venkaiah B, Hasnain SE, Sarkar DP. (1998) Site specific gene delivery in-vivo through engineered Sendai viral envelopes. Proceedings of the National Academy of Sciences, USA, 95: 11886-11890.
  • (83) .Ghosh S, Jain A, Mukherjee B, Habib S, Hasnain SE. (1998) The host factor polyhedrin promoter binding protein (PPBP) is involved in transcription from the baculovirus polyhedrin gene promoter. Journal of Virology, 72: 7484-7493.
  • (82). Siddiqi N, Shamim M, Jain NK, Rattan A, Amin A, Katoch VM, Sharma SK, Hasnain, SE. (1998) Molecular genetic analyses of multidrug resistance in Indian isolates of Mycobacterium tuberculosis. Memorias Institute Oswaldo Cruz 93: 589-594.
  • (81) .Krishnamurthy S, Chatterjee U, Gupta V, Prasad R, Das P, Snehlata P, Hasnain SE, Prasad R. (1998) Deletion of transmembrane domain (TM) 12 of CDR1, a multidrug transporter from Candida albicans, leads to altered drug specificity. Yeast 14: 535.
  • (80). Ali S, Ansari S, Ehtesham NZ, Azfer MA, Homkar U, Gopal R, Hasnain SE. (1998) Analysis of the evolutionarily conserved repeat motifs in the genome of the highly endangered central Indian barasingha Cervus duvauceli branderi. Gene. 223: 361-367.
  • (79). Hasnain S.E., Amin A., Siddiqi N, Shamim M, Jain NK, Rattan A, Katoch VM, Sharma S.K. (1998) Molecular genetics of multiple drug resistance (MDR) in Mycobacterium tuberculosis. In Proceedings of the IV Annual Ranbaxy Science Foundation Symposium (Eds. Sharma, P.L. and Sood, O.P.) Ranbaxy Science Foundation, New Delhi pp 35-40.
  • (78). Dil-Afroze, Misra A, Sulaiman IM, Sinha S, Sarkar C, Mahapatra AK, Hasnain SE. (1998) Genetic alterations in brain tumors identified by RAPD analysis. Gene 206: 45-48.
1997
  • (77) .Sinha S, Dil-Afroze, Misra A, Sulaiman IM, Sarkar C, Mahapatra AK, Hasnain SE. (1997) Changes in brain tumor genome identified by RAPD analysis. The FASEB Journal 11:2313.
  • (76) .Chatterjee O, Chaudhuri S, Habib S, Hasnain S.E. and Sarkar P.K. (1997) Application of baculovirus expressed thyroid hormone receptor in identifying thyroid response element in actin gene. In; Invertebrate Cell Culture: Novel Directions and Biotechnology Applications (Eds. K. Marmorosch and J. Mitsuhashi) Science Publishers, Inc, New Hampshire, USA, pp 228-232.
  • (75). Jain A, Ranjan A, Chatterji U, Das P, Ghosh S, Habib S, Pandey S, Ramachandran A, Venkaiah B, Hasnain S.E. (1997) High level of expression of heterologous genes in insect cells is not dependent on promoters alone. In; Invertebrate Cell Culture: Novel Directions and Biotechnology Applications (Eds. K. Marmorosch and J. Mitsuhashi) Science Publishers, Inc, New Hampshire, USA, pp 221-227.
  • (74) .Hasnain SE, Liljestrom P, and Roy P. (1997) Eukaryotic expression vector systems; biology and applications. Gene 190.
  • (73). Awasthi AK, Jha PK, Ranjan A, Hasnain SE. (1997) Monitoring recombinant baculovirus replication in Spodoptera litura (Lepidoptera: Noctuidae) larvae by using firefly luciferase gene as a reporter. Annals of the Entomological Society of USA 90: 832.
  • (72). Raghu P, Habib S, Hasnain SE, Hasan G. (1997) Development of a functional assay for Ca2+ release activity of IP3R and expression of an IP3R gene fragment in the baculovirus-insect cell system. Gene 190: 151-156.
  • (71). Habib S, Hasnain SE. (1997) A bifunctional baculovirus homologous region (hr1) sequence: enhancer and origin of replication functions reside within the same sequence element. Current Science 73: 658.
  • (70). Talwar GP, Singh Om, Gupta SK, Hasnain SE, Pal R, Majumdar SS, Vrati S, Mukhopadhya A, Srinivasan J, Deshmukh U, Ganga S, Mandokhot A, Gupta A (1997) The HSD-hCG vaccine prevents pregnancy in women: Feasibility study of a reversible safe contraceptive vaccine. American Journal of Reproductive Immunology 37: 153.
  • (69). Hasnain SE, Jain A, Habib S, Ghosh S, Chatterji U, Ramachandran A, Das P, Venkaiah B, Liang B, Azim CA (1997) Involvement of host factors in transcription from baculovirus late gene promoters. Gene 190: 113-11.
1996
  • (68) .Habib S, Hasnain SE (1996) A 38 kDa host factor interacts with functionally important motifs within the AcMNPV homologous region (hr1) DNA sequence. Journal of Biological Chemistry, 271: 28250-28258.
  • (67) .Hasnain SE Habib S, Jain A, Burma S, Mukherjee B (1996) A host factor with single stranded DNA binding activity is involved in transcription from the baculovirus polyhedrin promoter. Methods in Enzymology: RNA Polymerase and Associated Factors (Volume Editor, Sankar Adhya, Editors in Chief, John N. Abelson and Melvin I. Simon), Volume 274, Academic Press, New York, USA pp 20-27.
  • (66). Jain A, Hasnain SE (1996) A 30-kDa host protein binds to two very-late baculovirus promoter. European Journal of Biochemistry, 239: 384-390.
  • (65) .Habib S, Pandey S, Chatterji U, Burma S, Jain A, Ahmad R, Hasnain SE (1996) Bifunctionality of the homologous region sequence (hr1); Enhancer and ori functions have different sequence requirements. DNA & Cell Biology, 15: 737-747.
  • (64). Jha PK, Sridhar P, Hasnain SE (1996) Analyses of some of the processes involved in baculovirus expression of foreign genes in insect cells and caterpillars. In Trends in Molecular Biology and Biotechnology (Eds. Srivastava, S., Srivastava, P.S. and Tiwary, B.N.) CBS Publications & Distributors, New Delhi, pp 29-40.
  • (63). Habib S, Burma S, Chatterjee U, Das P, Jain A, Mukherjee B, Natarajan K, Ranjan A, Hasnain SE (1996) Transcriptional regulation of the AcNPV polyhedrin gene promoter. Current Developments in Animal Virology (Eds. S. Jameel and E.K. Wagner) Science Publishers Inc., Lebanon, N.H., USA, pp 205-210.
  • (62). Chatterji U, Ahmad R, Venkaiah B, Hasnain SE (1996) A recombination efficient baculovirus vector for simultaneous expression of multiple genes. Gene, 1996 171: 209-213.
  • (61). Mishra N, Habib S, Ranjan A, Hasnain SE, Nath I. (1996) Expression and functional characterization of the clpC gene of Mycobacterium leprae: clpC protein elicits human antibody response. Gene. 172: 99
  • (60) .Das A, Lal A, Talwar GP, Hasnain SE, Sinha S. (1996) A one step lysis procedure for 18S rRNA based diagnosis of malaria. Analytical Biochemistry 241: 262-264.
  • (59). Joshi AR, Sinha S, Dil-Afroze, Sulaiman IM, Banerji AK, Hasnain SE. (1996) Alterations in brain tumor DNA detected by a fingerprinting probe. Indian Journal of Biochemistry & Biophysics 33: 455.
  • (58). Raina A, Sulaiman IM, Ehtesham NZ, Das P, Ali S, Dogra TD, Hasnain SE. (1996) Characterization of a human alphoid satellite DNA sequence: Potential use in assessing genetic diversity in Indian populations. Gene. 173: 247-250.
  • (57). Sulaiman IM, Hasnain SE. (1996) Random amplified polymorphic DNA (RAPD) markers reveal genetic homogeneity in the endangered Himalayan species, Meconopsis paniculata and M. simplicifolia. Theoretical & Applied Genetics 93: 9.
  • (56). Bomjen G, Raina A, Sulaiman IM, Hasnain SE, Dogra TD (1996) Effect of storage of blood on DNA yield, quality and fingerprinting : A forensic approach. Indian Journal of Experimental Biology 34: 384.
1995
  • (55) .Mukherjee B, Burma S, Hasnain SE (1995) The 30 kDa protein binding to the ‘initiator’ of the baculovirus polyhedrin promoter also binds specifically to the coding strand. Journal of Biological Chemistry, 270: 4405-4411.
  • (54) .Mukherjee B, Burma S, Talwar GP, Hasnain SE (1995) Transcriptional regulation of cell line dependent baculovirus mediated expression of foreign genes. DNA & Cell Biology, 14: 7-14.
  • (53). Ranjan A, Hasnain SE (1995) Codon usage in the prototype baculovirusAutograph californica nuclear polyhedrosis virus. Indian Journal of Biochemistry & Biophysics 32: 424.
  • (52) .Das A, Holloway B, Collins WE, Sharma VP, Ghosh SK, Sinha S, Hasnain SE, Talwar GP, Lal AA (1995) Species specific 18S rRNA gene amplification for the detection of P.falciparum and P.vivax malaria parasites. Molecular & Cellular Probes 9: 161.
  • (51). Bomjen G, Raina A, Sulaiman IM, Hasnain SE, Dogra TD (1995) Effect of storage of blood samples on DNA yield, quality and fingerprinting: a forensic approach. Indian J Exp Biol. 34(4):384-6.
  • (50). Sulaiman IM, Ehtesham NZ, Hasnain SE. (1995) A multicopy DNA sequence from M. simplicifolia discriminates between the different species of this endangered Himalayan poppy. Gene 156: 223-227.
  • (49) .Sulaiman IM, Hasnain SE (1995) DNA polymorphism analysis in five endangered species of Meconopsis (Himalayan poppy) using multi-copy sequence based probes. Electrophoresis 16: 1746-1749.
1994
  • (48) .Ranjan A, Hasnain SE (1994) Influence of codon usage and translation initiation codon context in the AcNPV-based expression system: Computer analysis using homologous and heterologous genes. Virus Genes, 9: 149.
  • (47) .Burma S, Mukherjee B, Jain A, Habib S, Hasnain SE (1994) An unusual 30 kDa protein binding to the polyhedrin gene promoter of Autographa californica nuclear polyhedrosis virus. Journal of Biological Chemistry, 269: 2750.
  • (46). Hasnain SE, Nakhai B, Ehtesham NZ, Sridhar P, Ranjan A, Talwar GP, Jha PK (1994)  subunit of hCG hormone and firefly luciferase simultaneously synthesized in insect cells using a recombinant baculovirus are differentially expressed and transported. DNA & Cell Biology 13: 275.
  • (45) .Sridhar P, Awasthi AK, Azim CA, Burma S, Habib S, Jain A, Mukherjee B, Ranjan A, Hasnain SE (1994) Baculovirus vector-mediated expression of heterologous genes in insect cells. Journal of Biosciences 19: 603.
  • (44). Burma S, Hasnain SE (1994) The baculovirus expression vector system: Regulation of the polyhedrin gene promoter. Proceedings of the Indian National Science Academy 60: 365.
1993
  • (43) .Sridhar P, Panda AK, Pal R, Talwar GP, Hasnain SE (1993) Temporal nature of the promoter and not relative strength determines the expression of an extensively processed protein in a baculovirus system. FEBS Letters, 315: 282.
  • (42) .Jain A, Hasnain SE (1993) After split genes it is now split proteins. Current Science 65: 907.
  • (41). Jha PK, Qadri A, Hasnain SE (1993) A monoclonal antibody against firefly luciferase enzyme. Indian Journal of Experimental Biology 31: 106.
  • (40) .Sridhar P, Hasnain SE (1993) Differential secretion and glycosylation of recombinant human chorionic gonadotropin (bhCG) synthesized using different promoters in the baculovirus expression vector system. Gene 131: 261.
1992
  • (39). Jha PK, Pal R, Nakhai B, Sridhar P, Hasnain SE (1992) Simultaneous synthesis of enzymatically active luciferase and biologically active bsubunit of human chorionic gonadotropin in caterpillars infected with a recombinant baculovirus. FEBS Letters 310: 148.
  • (38). Nakhai B, Sridhar P, Pal R, Talwar GP, Hasnain SE (1992) Overexpression and characterization of the b-subunit of the human chorionic gonadotropin hormone synthesized in insect cells infected with a genetically engineered baculovirus. Indian Journal of Biochemistry & Biophysics 29: 315.
  • (37). Hasnain SE (1992) Immunology: Pasteur’s Heritage – A review. Journal of the American Medical Association 12: 100.
  • (36). Ehtesham NZ, Das AK, Hasnain SE (1992) A novel probe for human DNA fingerprinting based on chi-like sequences. Gene 111: 261.
  • (35). Ehtesham NZ, Hasnain SE. (1992) A multilocus probe for DNA fingerprinting. Advances in Forensic Haemogenetics 4: 137.
1991
  • (34) .Ehtesham NZ, Ma DP, Hasnain SE (1991) Nucleotide sequence of a human satellite DNA. Gene 98: 301
  • (33) .Jha PK, Ehtesham NZ, Dhar R, Hasnain SE. (1991) Intracellular trafficking of proteins in insect cells and larvae infected with
    recombinant baculovirus. Journal of Cellular Biochemistry 15: 197.
  • (32). Ehtesham NZ, Hasnain SE. (1991) Direct in-gel hybridization without blotting using nick translated DNA probes. Biotechniques 11: 718.
  • (31) .Nakhai B, Sridhar P, Hasnain SE. (1991) Is processing of overexpressed proteins in insect cells infected with recombinant baculovirus impaired due to a “secretory load”? Journal of Cellular Biochemistry 15: 201.
  • (30). Raghupathy R, Hasnain SE. (1991) Basic and biomedical productoriented research – the National Institute of Immunology. Current Science 60: 5.
  • (29). Nakhai B, Pal R, Talwar GP, Hasnain SE. (1991) The alpha subunit of human chorionic gonadotropin hormone synthesized in insect cells using a baculovirus vector is biologically active. FEBS Letters 283: 104.
  • (28). Nakhai B, Sridhar P, Talwar GP, Hasnain SE. (1991) Construction, purification and characterization of recombinant baculovirus containing the gene for b-subunit of hCG. Indian Journal of Biochemistry & Biophysics 28: 23.
1990
  • (27) .Hasnain SE, Nakhai B. (1990) Expression of the gene encoding firefly luciferase in insect cells using a baculovirus vector. Gene 91: 135.
  • (26) .Jha PK, Nakhai B, Sridhar P, Talwar GP, Hasnain SE. (1990) Firefly luciferase, synthesized to very high levels in caterpillars infected with a recombinant baculovirus, can also be used as an efficient reporter enzyme in-vivo. FEBS Letters 274: 23.
  • (25). Ehtesham NZ, Talwar GP, Ali A, Hasnain SE. (1990) Molecular cloning of human satellite DNA sequences and their use in detecting DNA polymorphism. Indian Journal of Biochemistry & Biophysics 27: 275.
  • (24) .Ma DP, Yang YW, King TY, Hasnain SE. (1990) The mitochondrial apocytochrome b gene from Chlamydomonas reinhardtii. Plant Molecular Biology 15: 357.
  • (23). Jha PK, Burma S, Mukherjee B, Hasnain SE. (1990) Expression of foreign genes in insect cells using baculovirus vectors. BioDigest 4: 93.
1989
  • (22) .Ma DP, Yang YW, King YT, Hasnain SE. (1989) Nucleotide sequence of cloned nad4 (urf4) gene from C. reinhardti mitochondrial DNA. Gene 85: 363.
  • (21) .Ma DP, Yang YW, Hasnain SE. (1989) Nucleotide sequence of Chlamydomonas reinhardtii mitochondrial genes encoding tRNA (GlnUUG) and tRNA(Met-CAU). Nucleic Acids Research 17: 1256.
  • (20). Derose RT, Ma DP, Kwon IS, Hasnain SE, Klassy RC, Hall TC. (1989) Characterization of the kafirin gene family from sorghum reveals extensive homology with zein from maize. Plant Molecular Biology 12: 245.
1988
  • (19) .Manavathu EK, Suryanarayana K, Hasnain SE, Leung WC. (1988) DNAmediated transformation of the aquatic fungus Achlya ambisexualis. Journal of General Microbiology 134: 2019.
  • (18) .Leung WC, Manavathu EK, Zwaagstra J, Suryanarayana K, Hasnain SE, Leung M (1988) Development of fungal and algal cells for expression of herpes virus genes. In Applied Virology Research Vol. 1 (Eds. E. Krustak, et-al.) Plenum Publishing Corporation, pp 25-29.
  • (17). Manavathu EK, Suryanarayana K, Hasnain SE and Leung WC. (1988) Presence of DNA sequences homologous to the ras oncogene in the aquatic fungus Achlya ambisexualis: Possible role in sporangiogenesis. Current Microbiol. 17: 183.
  • (16) .Ma DP, Yang YW, Hasnain SE. (1988) Nucleotide sequence of C.reinhardtii mitochondrial genes coding for subunit 6 of NADH dehydrogenase and tRNA(Trp). Nucleic Acids Research 16: 11373.
1987
  • (15) .Hasnain SE, Manavathu EK, Leung WC. (1987) A method for DNAmediated transformation of Chlamydomonas reinhardi. Biotechniques 5: 110.
  • (14) .Hasnain SE, Manavathu EK, Leung WC. (1987) pXmnATG: An E.coli vector for expression of unfused proteins. Nucleic Acids Research 15: 3925.
  • (13). Manavathu EK, Suryanarayana K, Hasnain SE, Leung M, Lau YF, Leung WC. (1987) Expression of HSV thymidine kinase gene in aquatic fungus Achlya ambisexualis. Gene 57: 5.
1986
  • (12) .Manavathu EK, Hasnain SE, Leung WC. (1986) Cloning of the Saccharomyces cerevisiae phosphoglycerate kinase gene: Use of synthetic oligonucleotide probes. The Nucleus 29: 188.
1985
  • (11) .Leung W.C., Liu A.P., Wu X.N., Hasnain S.E., Ritzel G., Jing G.Z. (1985) Protein engineering of human interferon gamma by using novel approaches for chemical-enzymatic gene synthesis and fragment replacement method for site specific mutagenesis. In The Biology of the Interferon System (Eds. H. Kirchener and H. Schellekens) Elsevier Science Publishers, Netherlands, pp 419.
  • (10) .Hasnain SE, Manavathu EK, Leung WC. (1985) DNA mediated transformation of Chlamydomonas reinhardi cells: Use of aminoglycoside 3′-phosphotransferase as a selectable marker. Molecular & Cellular Biology 5: 3647.
1984
  • (9) .Leung W.C., Jing G.Z, Hasnain S.E., Tang S.C., Leung M. (1984) A direct cloning expression system for neutralization antigens of herpes simplex viruses. Modern Approaches to Vaccines (Eds. R.M. Chanock and R.A. Lerner) Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, pp 179.
1982
  • (8) .Hasnain SE, Khan MA, Upadhyaya KC. (1982) A deoxyribonuclease activity from Chlamydomonas reinhardi. Proceedings of the Indian National Science Academy B48: 416.
  • (7) .Hasnain SE, Khan MA, Upadhyaya KC. (1982) An ion stimulated plasma membrane ATPase activity from Chlamydomonas reinhardi. Ind. J. Exp. Biol. 20: 85.
  • (6) .Hasnain SE, Upadhyaya KC. (1982) On the transport of 2-aminoisobutyric acid in Chlamydomonas protoplasts. Ind. J. Exp. Biol. 20: 175.
1980
  • (5) .Hasnain SE, Khan MA, Khaneja K, Upadhyaya KC. (1980) Characterization of plasma membrane ATPase from Chlamydomonas reinhardi. Ind J Biochem Biophys 17: 58.
  • (4) .Hasnain SE, Khan MA, Upadhyaya KC. (1980) DNAse from Chlamydomonas reinhardi: Primary characterization and inhibition by polyamines. European J Cell Biol 22: 100.
  • (3). Upadhyaya KC, Hasnain SE (1980) Genetic manipulation in photosynthetic eucaryotes: Uptake of exogenous DNA. Journal of Scientific & Industrial Research 39: 641.
  • (2) .Hasnain SE, Ganesan K, Upadhyaya KC (1980) Mechanism of DNA uptake by polycations: Effect of polycations on DNA, DNase and plasma
    membrane. Ind J Exp Biol 18: 1230.
  • (1). Hasnain SE, Khan MA, Upadhyaya KC. (1980) Effect of polycations on thermal damage of C reinhardi protoplasts. Ind J Exp Biol 18: 1037.

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